STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEK19133.1PFAM: Glycosyl transferase family 2; JGI identifier:CP488_02417. (351 aa)    
Predicted Functional Partners:
CEK19127.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1; Glycosyl transferase 4-like domain; JGI identifier:CP488_02415.
 
    0.809
CEK19130.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1; Glycosyl transferase 4-like domain; JGI identifier:CP488_02416.
  
    0.783
CEK19142.1
PFAM: NAD dependent epimerase/dehydratase family; JGI identifier:CP488_02420.
  
    0.782
CEK19148.1
Acetyltransferase (isoleucine patch superfamily); PFAM: Bacterial transferase hexapeptide (six repeats); JGI identifier:CP488_02422.
  
    0.777
CEK19145.1
Methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: Methyltransferase domain; JGI identifier:CP488_02421.
  
    0.775
CEK19136.1
Hypothetical protein; JGI identifier:CP488_02418.
       0.773
CEK19139.1
Predicted glycosyltransferase; PFAM: Glycosyl transferase family 2; JGI identifier:CP488_02419.
       0.773
CEK19153.1
Hypothetical protein; JGI identifier:CP488_02424.
  
  
 0.766
CEK19151.1
Predicted glycosyltransferase; PFAM: Glycosyl transferase family 2; JGI identifier:CP488_02423.
       0.757
CEK19174.1
PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate cytidylyltransferase; JGI identifier:CP488_02431.
 
   0.719
Your Current Organism:
Chthonomonas calidirosea
NCBI taxonomy Id: 454171
Other names: C. calidirosea, Chthonomonas calidirosea Lee et al. 2011, DSM 23976, ICMP 18418, strain T49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.