STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
macB-2ABC-type antimicrobial peptide transport system, ATPase component; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides. (256 aa)    
Predicted Functional Partners:
CEK19773.1
ABC-type antimicrobial peptide transport system, permease component; PFAM: MacB-like periplasmic core domain; FtsX-like permease family; JGI identifier:CP488_02634.
 
 0.995
CEK13686.1
ABC-type antimicrobial peptide transport system, permease component; PFAM: MacB-like periplasmic core domain; FtsX-like permease family; JGI identifier:CP488_00585.
 
 0.986
CEK16092.1
ABC-type antimicrobial peptide transport system, permease component; PFAM: MacB-like periplasmic core domain; FtsX-like permease family; JGI identifier:CP488_01389.
 
 0.986
CEK19641.1
ABC-type antimicrobial peptide transport system, permease component; PFAM: MacB-like periplasmic core domain; FtsX-like permease family; JGI identifier:CP488_02589.
 
 0.986
CEK13191.1
ABC-type transport system, involved in lipoprotein release, permease component; PFAM: FtsX-like permease family; JGI identifier:CP488_00407.
 
 
 0.945
CEK19776.1
PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; JGI identifier:CP488_02635; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.908
CEK16097.1
Multidrug resistance efflux pump; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; JGI identifier:CP488_01391.
 
 
 0.815
CEK19644.1
Multidrug resistance efflux pump; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; JGI identifier:CP488_02590.
 
 
 0.781
CEK15730.1
ABC-type transport system, involved in lipoprotein release, permease component; PFAM: MacB-like periplasmic core domain; FtsX-like permease family; JGI identifier:CP488_01266.
  
 
 0.779
CEK19770.1
Hypothetical protein; JGI identifier:CP488_02633.
       0.741
Your Current Organism:
Chthonomonas calidirosea
NCBI taxonomy Id: 454171
Other names: C. calidirosea, Chthonomonas calidirosea Lee et al. 2011, DSM 23976, ICMP 18418, strain T49
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