STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDM64033.1Beta-xylosidase; PFAM: Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family. (541 aa)    
Predicted Functional Partners:
CDM64162.1
Predicted unsaturated glucuronyl hydrolase; PFAM: Glycosyl Hydrolase Family 88.
     0.917
CDM64751.1
Endopolygalacturonase; PFAM: Pectate lyase superfamily protein.
 
  0.907
CDM65127.1
Alpha-glucuronidase; PFAM: Glycosyl hydrolase family 67 C-terminus; Glycosyl hydrolase family 67 middle domain; Glycosyl hydrolase family 67 N-terminus; Belongs to the glycosyl hydrolase 67 family.
   
 0.903
CDM64039.1
Endopolygalacturonase; PFAM: Glycosyl hydrolases family 28; Belongs to the glycosyl hydrolase 28 family.
 
  0.839
CDM65132.1
Beta-1,4-xylanase; PFAM: Glycosyl hydrolase family 10.
  
 0.811
CDM64189.1
Beta-galactosidase/beta-glucuronidase; PFAM: Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2; Glycosyl hydrolases family 2, sugar binding domain; Belongs to the glycosyl hydrolase 2 family.
 
  
  0.804
CDM64170.1
Lysophospholipase L1-like esterase; PFAM: GDSL-like Lipase/Acylhydrolase family.
 
  
 0.795
CDM64167.1
Lysophospholipase L1-like esterase; PFAM: GDSL-like Lipase/Acylhydrolase family.
 
  
 0.793
CDM64037.1
PFAM: Pectinesterase.
 
     0.788
CDM64038.1
PFAM: Pectic acid lyase; TIGRFAM: pectate lyase, PelA/Pel-15E family.
 
  
 0.777
Your Current Organism:
Pyrinomonas methylaliphatogenes
NCBI taxonomy Id: 454194
Other names: Acidobacteriaceae bacterium K22, DSM 25857, ICMP 18710, P. methylaliphatogenes, Pyrinomonas methylaliphatogenes Crowe et al. 2014, strain K22
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