STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDM64090.1Hypothetical protein; PFAM: Putative glycosyl hydrolase of unknown function (DUF1680). (817 aa)    
Predicted Functional Partners:
CDM64741.1
PFAM: Alpha-L-arabinofuranosidase C-terminus.
 
     0.763
CDM64833.1
PFAM: Alpha-L-arabinofuranosidase C-terminus.
 
     0.763
CDM66036.1
Beta-xylosidase; PFAM: Glycosyl hydrolases family 43.
 
     0.761
CDM64832.1
Predicted beta-xylosidase; PFAM: Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
 
     0.759
CDM64167.1
Lysophospholipase L1-like esterase; PFAM: GDSL-like Lipase/Acylhydrolase family.
  
     0.739
CDM64170.1
Lysophospholipase L1-like esterase; PFAM: GDSL-like Lipase/Acylhydrolase family.
  
     0.734
CDM64189.1
Beta-galactosidase/beta-glucuronidase; PFAM: Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2; Glycosyl hydrolases family 2, sugar binding domain; Belongs to the glycosyl hydrolase 2 family.
  
     0.725
CDM64194.1
Glycerol-3-phosphate dehydrogenase; PFAM: Glycosyl hydrolase family 65, N-terminal domain.
  
     0.723
CDM64171.1
Beta-galactosidase/beta-glucuronidase; PFAM: Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2; Glycosyl hydrolases family 2, sugar binding domain; Belongs to the glycosyl hydrolase 2 family.
  
     0.703
CDM64093.1
Hypothetical protein.
 
     0.699
Your Current Organism:
Pyrinomonas methylaliphatogenes
NCBI taxonomy Id: 454194
Other names: Acidobacteriaceae bacterium K22, DSM 25857, ICMP 18710, P. methylaliphatogenes, Pyrinomonas methylaliphatogenes Crowe et al. 2014, strain K22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.