STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDM64104.1PFAM: Glycosyl-hydrolase 97 N-terminal; Glycoside hydrolase 97; Glycosyl-hydrolase 97 C-terminal, oligomerisation. (669 aa)    
Predicted Functional Partners:
CDM64172.1
Beta-galactosidase/beta-glucuronidase; PFAM: F5/8 type C domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain; Belongs to the glycosyl hydrolase 2 family.
  
    0.696
CDM65697.1
Alpha-1,2-mannosidase, putative; PFAM: Glycosyl hydrolase family 92; TIGRFAM: alpha-1,2-mannosidase, putative.
  
     0.640
CDM64189.1
Beta-galactosidase/beta-glucuronidase; PFAM: Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2; Glycosyl hydrolases family 2, sugar binding domain; Belongs to the glycosyl hydrolase 2 family.
  
    0.632
CDM64171.1
Beta-galactosidase/beta-glucuronidase; PFAM: Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2; Glycosyl hydrolases family 2, sugar binding domain; Belongs to the glycosyl hydrolase 2 family.
  
    0.614
CDM64195.1
Predicted unsaturated glucuronyl hydrolase; PFAM: Glycosyl Hydrolase Family 88.
 
  
 0.605
CDM64751.1
Endopolygalacturonase; PFAM: Pectate lyase superfamily protein.
 
  0.597
CDM64038.1
PFAM: Pectic acid lyase; TIGRFAM: pectate lyase, PelA/Pel-15E family.
  
  
  0.551
CDM64122.1
Hypothetical protein; PFAM: Putative glucoamylase.
  
     0.549
CDM66830.1
PFAM: Glycosyl hydrolases family 31; Galactose mutarotase-like.
  
  
  0.547
CDM64312.1
PFAM: 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase.
    
  0.528
Your Current Organism:
Pyrinomonas methylaliphatogenes
NCBI taxonomy Id: 454194
Other names: Acidobacteriaceae bacterium K22, DSM 25857, ICMP 18710, P. methylaliphatogenes, Pyrinomonas methylaliphatogenes Crowe et al. 2014, strain K22
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.