STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDM64133.1ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter. (318 aa)    
Predicted Functional Partners:
CDM64576.1
ABC-type multidrug transport system, permease component; PFAM: ABC-2 family transporter protein.
 
 
  0.947
CDM64575.1
ABC-type multidrug transport system, permease component; PFAM: ABC-2 family transporter protein.
 
 
  0.943
CDM64132.1
ABC-type multidrug transport system, permease component; PFAM: ABC-2 type transporter.
  
 
  0.849
CDM64844.1
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component; PFAM: ABC transporter; C-terminal AAA-associated domain.
 
  
 
0.826
CDM65568.1
ABC-type transport system involved in multi-copper enzyme maturation, permease component; PFAM: ABC-2 family transporter protein.
  
 0.799
CDM64134.1
Predicted Fe-S oxidoreductase; PFAM: Radical SAM superfamily.
  
 
  0.783
CDM64129.1
Predicted xylanase/chitin deacetylase; PFAM: Polysaccharide deacetylase.
  
    0.781
CDM64130.1
UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase; PFAM: Glycosyl transferases group 1; Monogalactosyldiacylglycerol (MGDG) synthase.
       0.773
CDM64131.1
UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase; PFAM: Glycosyl transferases group 1; Monogalactosyldiacylglycerol (MGDG) synthase.
       0.773
CDM64135.1
3-hydroxyacyl-(acyl-carrier-protein) dehydratase; PFAM: FabA-like domain.
       0.714
Your Current Organism:
Pyrinomonas methylaliphatogenes
NCBI taxonomy Id: 454194
Other names: Acidobacteriaceae bacterium K22, DSM 25857, ICMP 18710, P. methylaliphatogenes, Pyrinomonas methylaliphatogenes Crowe et al. 2014, strain K22
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