STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDM64188.1PFAM: Glycosyl hydrolases family 2, sugar binding domain. (924 aa)    
Predicted Functional Partners:
CDM64170.1
Lysophospholipase L1-like esterase; PFAM: GDSL-like Lipase/Acylhydrolase family.
 0.965
CDM64167.1
Lysophospholipase L1-like esterase; PFAM: GDSL-like Lipase/Acylhydrolase family.
 0.895
CDM64189.1
Beta-galactosidase/beta-glucuronidase; PFAM: Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2; Glycosyl hydrolases family 2, sugar binding domain; Belongs to the glycosyl hydrolase 2 family.
 
    0.830
CDM64038.1
PFAM: Pectic acid lyase; TIGRFAM: pectate lyase, PelA/Pel-15E family.
  
 0.818
CDM64345.1
Glycogen debranching enzyme; PFAM: Bacterial alpha-L-rhamnosidase; Alpha-L-rhamnosidase N-terminal domain.
  
     0.767
CDM64343.1
Lysophospholipase L1-like esterase; PFAM: GDSL-like Lipase/Acylhydrolase family.
  
 0.762
CDM64751.1
Endopolygalacturonase; PFAM: Pectate lyase superfamily protein.
  
 
 0.732
CDM64936.1
PFAM: Cysteine-rich secretory protein family.
  
    0.717
CDM64037.1
PFAM: Pectinesterase.
  
  
 0.711
CDM64193.1
PFAM: Oligogalacturonate lyase.
 
  
  0.704
Your Current Organism:
Pyrinomonas methylaliphatogenes
NCBI taxonomy Id: 454194
Other names: Acidobacteriaceae bacterium K22, DSM 25857, ICMP 18710, P. methylaliphatogenes, Pyrinomonas methylaliphatogenes Crowe et al. 2014, strain K22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.