STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDM64293.1Outer membrane receptor for ferrienterochelin and colicins; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Carboxypeptidase regulatory-like domain. (768 aa)    
Predicted Functional Partners:
CDM64290.1
ABC-type Fe3+-siderophore transport system, permease component; PFAM: FecCD transport family; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
    0.773
hmuV
ABC-type hemin transport system, ATPase component; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
 
     0.712
CDM64291.1
ABC-type hemin transport system, periplasmic component; PFAM: Periplasmic binding protein.
 
  
 0.682
CDM64240.1
PFAM: Outer membrane efflux protein.
  
     0.611
CDM64292.1
Hypothetical protein.
       0.535
CDM64294.1
Cupin domain-containing protein; PFAM: Cupin domain.
       0.535
CDM64288.1
Putative heme degradation protein; PFAM: Haemin-degrading HemS.ChuX domain.
 
    0.528
CDM66890.1
ABC-type Fe3+-siderophore transport system, permease component; PFAM: FecCD transport family; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
    0.502
CDM64145.1
PFAM: Outer membrane efflux protein.
  
     0.470
CDM65474.1
PFAM: Outer membrane efflux protein.
  
     0.456
Your Current Organism:
Pyrinomonas methylaliphatogenes
NCBI taxonomy Id: 454194
Other names: Acidobacteriaceae bacterium K22, DSM 25857, ICMP 18710, P. methylaliphatogenes, Pyrinomonas methylaliphatogenes Crowe et al. 2014, strain K22
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