STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDM64312.1PFAM: 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase. (507 aa)    
Predicted Functional Partners:
CDM65622.1
PFAM: Carbohydrate phosphorylase; Protein of unknown function (DUF3417); TIGRFAM: alpha-glucan phosphorylases.
 
 
 0.936
glgA
Glycogen synthase (ADP-glucose); Synthesizes alpha-1,4-glucan chains using ADP-glucose.
 
 
 0.875
CDM66659.1
PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate adenylyltransferase.
 
  
 0.760
CDM64311.1
Cytochrome c, mono-and diheme variants family; PFAM: Cytochrome C oxidase, cbb3-type, subunit III; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III.
       0.682
CDM65352.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1; Glycosyl transferase 4-like domain.
     
 0.629
CDM66458.1
NTP pyrophosphohydrolase; PFAM: NUDIX domain; TIGRFAM: nudix-type nucleoside diphosphatase, YffH/AdpP family.
     
 0.611
CDM66830.1
PFAM: Glycosyl hydrolases family 31; Galactose mutarotase-like.
    
 0.591
CDM64044.1
Glucoamylase; PFAM: Glycosyl hydrolases family 15; TIGRFAM: oligosaccharide amylase.
    
  0.589
CDM66881.1
UDP-glucose pyrophosphorylase; PFAM: Nucleotidyl transferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase.
     
 0.588
CDM65330.1
Nucleotidyltransferase; PFAM: Nucleotidyl transferase; Bacterial transferase hexapeptide (six repeats).
    
 0.573
Your Current Organism:
Pyrinomonas methylaliphatogenes
NCBI taxonomy Id: 454194
Other names: Acidobacteriaceae bacterium K22, DSM 25857, ICMP 18710, P. methylaliphatogenes, Pyrinomonas methylaliphatogenes Crowe et al. 2014, strain K22
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