STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDM64317.1Protein-disulfide isomerase; PFAM: Thioredoxin. (238 aa)    
Predicted Functional Partners:
CDM64318.1
Predicted membrane protein; PFAM: Vitamin K epoxide reductase family.
 
  
 0.831
CDM64524.1
PFAM: Disulphide bond corrector protein DsbC.
  
 
 0.708
CDM66379.1
PFAM: Disulphide bond corrector protein DsbC.
  
 
 0.708
CDM64319.1
PFAM: Bacterial regulatory proteins, lacI family; Periplasmic binding protein-like domain.
  
  
 0.574
CDM64320.1
PFAM: Heparinase II/III-like protein.
  
    0.539
CDM67103.1
Thiol-disulfide isomerase-like thioredoxin; PFAM: AhpC/TSA family.
  
 
 0.532
CDM64316.1
Methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: Methyltransferase domain.
       0.493
CDM64283.1
PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase.
 
 
 
 0.448
CDM64315.1
Amino acid/polyamine/organocation transporter, APC superfamily (TC 2.A.3); PFAM: Amino acid permease.
       0.446
CDM64322.1
Dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like; PFAM: short chain dehydrogenase.
   
   0.440
Your Current Organism:
Pyrinomonas methylaliphatogenes
NCBI taxonomy Id: 454194
Other names: Acidobacteriaceae bacterium K22, DSM 25857, ICMP 18710, P. methylaliphatogenes, Pyrinomonas methylaliphatogenes Crowe et al. 2014, strain K22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.