Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDM64418.1 | CDM64419.1 | PYK22_00412 | PYK22_00413 | Predicted ATPase (AAA+ superfamily); PFAM: Protein of unknown function (DUF499). | Adenine-specific DNA methylase containing a Zn-ribbon; PFAM: Protein of unknown function (DUF1156). | 0.919 |
CDM64418.1 | CDM64420.1 | PYK22_00412 | PYK22_00414 | Predicted ATPase (AAA+ superfamily); PFAM: Protein of unknown function (DUF499). | DNA/RNA helicase, superfamily II, SNF2 family; PFAM: Helicase conserved C-terminal domain; Domain of unknown function (DUF3883); SNF2 family N-terminal domain. | 0.869 |
CDM64419.1 | CDM64418.1 | PYK22_00413 | PYK22_00412 | Adenine-specific DNA methylase containing a Zn-ribbon; PFAM: Protein of unknown function (DUF1156). | Predicted ATPase (AAA+ superfamily); PFAM: Protein of unknown function (DUF499). | 0.919 |
CDM64419.1 | CDM64420.1 | PYK22_00413 | PYK22_00414 | Adenine-specific DNA methylase containing a Zn-ribbon; PFAM: Protein of unknown function (DUF1156). | DNA/RNA helicase, superfamily II, SNF2 family; PFAM: Helicase conserved C-terminal domain; Domain of unknown function (DUF3883); SNF2 family N-terminal domain. | 0.888 |
CDM64420.1 | CDM64418.1 | PYK22_00414 | PYK22_00412 | DNA/RNA helicase, superfamily II, SNF2 family; PFAM: Helicase conserved C-terminal domain; Domain of unknown function (DUF3883); SNF2 family N-terminal domain. | Predicted ATPase (AAA+ superfamily); PFAM: Protein of unknown function (DUF499). | 0.869 |
CDM64420.1 | CDM64419.1 | PYK22_00414 | PYK22_00413 | DNA/RNA helicase, superfamily II, SNF2 family; PFAM: Helicase conserved C-terminal domain; Domain of unknown function (DUF3883); SNF2 family N-terminal domain. | Adenine-specific DNA methylase containing a Zn-ribbon; PFAM: Protein of unknown function (DUF1156). | 0.888 |