STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDM64422.1Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase; PFAM: Luciferase-like monooxygenase. (350 aa)    
Predicted Functional Partners:
CDM64421.1
Glutathione synthase/ribosomal protein S6 modification enzyme (glutaminyl transferase); PFAM: ATP-grasp domain.
 
     0.951
CDM65184.1
PFAM: Glycosyl transferase family 2.
   
 0.860
CDM65185.1
PFAM: Glycosyl transferase family 2.
   
 0.860
CDM66262.1
PFAM: Glycosyl transferase family 2.
   
 0.860
CDM65857.1
Predicted flavoprotein; PFAM: NADPH-dependent FMN reductase.
  
 0.797
CDM64844.1
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component; PFAM: ABC transporter; C-terminal AAA-associated domain.
 
 
 0.778
CDM66520.1
Quinol:cytochrome c oxidoreductase iron-sulfur protein precursor; PFAM: 4Fe-4S dicluster domain.
   
 
 0.752
CDM66926.1
NADPH-dependent glutamate synthase beta chain-like oxidoreductase; PFAM: Oxidoreductase NAD-binding domain.
  
 
 0.718
CDM66261.1
PFAM: Glycosyl transferase family 2.
   
 0.686
CDM66266.1
PFAM: Glycosyl transferase family 2.
   
 0.686
Your Current Organism:
Pyrinomonas methylaliphatogenes
NCBI taxonomy Id: 454194
Other names: Acidobacteriaceae bacterium K22, DSM 25857, ICMP 18710, P. methylaliphatogenes, Pyrinomonas methylaliphatogenes Crowe et al. 2014, strain K22
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