STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDM64572.1PFAM: Bacterial regulatory proteins, tetR family. (217 aa)    
Predicted Functional Partners:
CDM64573.1
Multidrug resistance efflux pump; PFAM: HlyD family secretion protein.
 
     0.649
CDM64459.1
Hypothetical protein; PFAM: Putative restriction endonuclease.
  
     0.550
CDM64458.1
Hypothetical protein; PFAM: Putative restriction endonuclease.
  
     0.542
CDM64574.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
 
     0.530
CDM66248.1
Hypothetical protein; PFAM: Putative restriction endonuclease.
  
     0.525
CDM64576.1
ABC-type multidrug transport system, permease component; PFAM: ABC-2 family transporter protein.
       0.499
CDM64575.1
ABC-type multidrug transport system, permease component; PFAM: ABC-2 family transporter protein.
       0.459
CDM64762.1
PFAM: Bacterial regulatory proteins, tetR family.
  
     0.452
CDM66260.1
Predicted glycosyltransferase; PFAM: Glycosyl transferase family 2.
  
     0.418
murJ
Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.
       0.409
Your Current Organism:
Pyrinomonas methylaliphatogenes
NCBI taxonomy Id: 454194
Other names: Acidobacteriaceae bacterium K22, DSM 25857, ICMP 18710, P. methylaliphatogenes, Pyrinomonas methylaliphatogenes Crowe et al. 2014, strain K22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.