STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDM64615.1Zn-dependent hydrolase, glyoxylase; PFAM: Metallo-beta-lactamase superfamily. (230 aa)    
Predicted Functional Partners:
CDM66173.1
MoaD family protein; PFAM: ThiS family; MoeZ/MoeB domain; Rhodanese-like domain; ThiF family; TIGRFAM: MoaD family protein, archaeal.
  
 0.787
CDM66157.1
Sulfite reductase (ferredoxin); PFAM: ThiS family; Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain.
     
 0.638
CDM64616.1
PFAM: Radical SAM superfamily; TIGRFAM: AmmeMemoRadiSam system radical SAM enzyme.
 
     0.601
CDM66438.1
Rhodanese-related sulfurtransferase; PFAM: Rhodanese-like domain.
 
 0.561
CDM64874.1
Rhodanese-related sulfurtransferase; PFAM: Protein of unknown function (DUF2892); Rhodanese-like domain.
  
  0.534
CDM64872.1
Zn-dependent hydrolase, glyoxylase; PFAM: Metallo-beta-lactamase superfamily; Rhodanese-like domain.
  
 
0.472
CDM64723.1
AMP-forming long-chain acyl-CoA synthetase; PFAM: Phosphopantetheine attachment site; Male sterility protein; Acyltransferase; AMP-binding enzyme; AMP-binding enzyme C-terminal domain; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases.
   
 
 0.428
CDM66542.1
Rhodanese-related sulfurtransferase; PFAM: Rhodanese-like domain.
  
 0.423
CDM65312.1
Metal-dependent hydrolase, beta-lactamase superfamily III; PFAM: Beta-lactamase superfamily domain.
  
  
 0.406
CDM67101.1
Rhodanese-related sulfurtransferase; PFAM: Rhodanese-like domain.
   
  0.402
Your Current Organism:
Pyrinomonas methylaliphatogenes
NCBI taxonomy Id: 454194
Other names: Acidobacteriaceae bacterium K22, DSM 25857, ICMP 18710, P. methylaliphatogenes, Pyrinomonas methylaliphatogenes Crowe et al. 2014, strain K22
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.