STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDM64848.1PFAM: VIT family. (167 aa)    
Predicted Functional Partners:
CDM64847.1
PFAM: Putative MetA-pathway of phenol degradation.
       0.655
CDM66173.1
MoaD family protein; PFAM: ThiS family; MoeZ/MoeB domain; Rhodanese-like domain; ThiF family; TIGRFAM: MoaD family protein, archaeal.
   
 
  0.643
CDM64846.1
Hypothetical protein.
 
     0.511
CDM66926.1
NADPH-dependent glutamate synthase beta chain-like oxidoreductase; PFAM: Oxidoreductase NAD-binding domain.
   
 
 0.486
Your Current Organism:
Pyrinomonas methylaliphatogenes
NCBI taxonomy Id: 454194
Other names: Acidobacteriaceae bacterium K22, DSM 25857, ICMP 18710, P. methylaliphatogenes, Pyrinomonas methylaliphatogenes Crowe et al. 2014, strain K22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.