STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDM65020.1Lactoylglutathione lyase-like lyase; PFAM: Glyoxalase-like domain. (141 aa)    
Predicted Functional Partners:
CDM65021.1
Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
       0.773
CDM65022.1
PFAM: Domain of unknown function (DUF1992).
  
    0.770
CDM65023.1
PFAM: Beta-lactamase enzyme family.
       0.731
CDM65854.1
Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides; PFAM: Antibiotic biosynthesis monooxygenase.
  
  
  0.633
CDM64872.1
Zn-dependent hydrolase, glyoxylase; PFAM: Metallo-beta-lactamase superfamily; Rhodanese-like domain.
   
 
  0.632
CDM66926.1
NADPH-dependent glutamate synthase beta chain-like oxidoreductase; PFAM: Oxidoreductase NAD-binding domain.
    
  0.600
CDM64201.1
methylmalonyl-CoA epimerase; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: methylmalonyl-CoA epimerase.
     
 0.589
CDM64487.1
Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF; PFAM: 2Fe-2S iron-sulfur cluster binding domain.
    
  0.588
CDM66522.1
Ferredoxin; PFAM: 2Fe-2S iron-sulfur cluster binding domain.
    
  0.587
CDM65531.1
PFAM: DJ-1/PfpI family; TIGRFAM: intracellular protease, PfpI family.
  
 
  0.541
Your Current Organism:
Pyrinomonas methylaliphatogenes
NCBI taxonomy Id: 454194
Other names: Acidobacteriaceae bacterium K22, DSM 25857, ICMP 18710, P. methylaliphatogenes, Pyrinomonas methylaliphatogenes Crowe et al. 2014, strain K22
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