STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDM65029.1PFAM: Glycosyl-hydrolase 97 N-terminal; Glycoside hydrolase 97; Glycosyl-hydrolase 97 C-terminal, oligomerisation. (643 aa)    
Predicted Functional Partners:
CDM65028.1
Alpha-galactosidase; PFAM: NPCBM/NEW2 domain; Melibiase.
 
  
  0.862
CDM64751.1
Endopolygalacturonase; PFAM: Pectate lyase superfamily protein.
 
  0.784
CDM65030.1
PFAM: Alginate lyase.
       0.750
CDM65031.1
Hypothetical protein.
       0.669
CDM65027.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family; PFAM: Bacterial extracellular solute-binding protein.
       0.625
CDM65033.1
Outer membrane receptor for ferrienterochelin and colicins; PFAM: TonB-dependent Receptor Plug Domain; Carboxypeptidase regulatory-like domain.
 
     0.617
CDM65032.1
PFAM: Alpha-L-fucosidase.
 
     0.594
CDM65697.1
Alpha-1,2-mannosidase, putative; PFAM: Glycosyl hydrolase family 92; TIGRFAM: alpha-1,2-mannosidase, putative.
  
     0.579
CDM64172.1
Beta-galactosidase/beta-glucuronidase; PFAM: F5/8 type C domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain; Belongs to the glycosyl hydrolase 2 family.
  
    0.556
CDM64171.1
Beta-galactosidase/beta-glucuronidase; PFAM: Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2; Glycosyl hydrolases family 2, sugar binding domain; Belongs to the glycosyl hydrolase 2 family.
  
    0.551
Your Current Organism:
Pyrinomonas methylaliphatogenes
NCBI taxonomy Id: 454194
Other names: Acidobacteriaceae bacterium K22, DSM 25857, ICMP 18710, P. methylaliphatogenes, Pyrinomonas methylaliphatogenes Crowe et al. 2014, strain K22
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