STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDM65086.1Glycosyltransferase; PFAM: Glycosyl transferases group 1. (368 aa)    
Predicted Functional Partners:
CDM65088.1
Predicted glycosyltransferase; PFAM: Glycosyl transferase family 2.
  
  
 0.773
CDM65087.1
PFAM: Tetratricopeptide repeat; Glycosyl transferase family 2.
  
    0.641
CDM65080.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
 
     0.568
CDM64532.1
PFAM: Glycosyltransferase Family 4; Glycosyl transferases group 1.
  
     0.518
CDM65196.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1; Glycosyl transferase 4-like domain.
  
     0.516
CDM65089.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1; Glycosyl transferase 4-like domain.
 
    
0.489
CDM65197.1
PFAM: Glycosyltransferase Family 4; Glycosyl transferases group 1.
  
     0.477
CDM65908.1
PFAM: Bacterial sugar transferase; CoA-binding domain; TIGRFAM: sugar transferase, PEP-CTERM system associated; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
  
 0.446
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
  
 
  0.437
CDM65194.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
  
     0.437
Your Current Organism:
Pyrinomonas methylaliphatogenes
NCBI taxonomy Id: 454194
Other names: Acidobacteriaceae bacterium K22, DSM 25857, ICMP 18710, P. methylaliphatogenes, Pyrinomonas methylaliphatogenes Crowe et al. 2014, strain K22
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.