STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDM65127.1Alpha-glucuronidase; PFAM: Glycosyl hydrolase family 67 C-terminus; Glycosyl hydrolase family 67 middle domain; Glycosyl hydrolase family 67 N-terminus; Belongs to the glycosyl hydrolase 67 family. (718 aa)    
Predicted Functional Partners:
CDM64033.1
Beta-xylosidase; PFAM: Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
   
 0.903
CDM65126.1
PFAM: Beta-galactosidase.
 
     0.869
CDM65132.1
Beta-1,4-xylanase; PFAM: Glycosyl hydrolase family 10.
 
   
 0.856
CDM65134.1
Beta-1,4-xylanase; PFAM: Glycosyl hydrolase family 10; Carbohydrate binding domain.
 
   
 0.831
CDM64167.1
Lysophospholipase L1-like esterase; PFAM: GDSL-like Lipase/Acylhydrolase family.
 
     0.737
CDM64170.1
Lysophospholipase L1-like esterase; PFAM: GDSL-like Lipase/Acylhydrolase family.
 
     0.707
CDM64038.1
PFAM: Pectic acid lyase; TIGRFAM: pectate lyase, PelA/Pel-15E family.
 
     0.703
CDM64037.1
PFAM: Pectinesterase.
  
     0.699
CDM64833.1
PFAM: Alpha-L-arabinofuranosidase C-terminus.
 
   
 0.697
CDM64741.1
PFAM: Alpha-L-arabinofuranosidase C-terminus.
 
   
 0.684
Your Current Organism:
Pyrinomonas methylaliphatogenes
NCBI taxonomy Id: 454194
Other names: Acidobacteriaceae bacterium K22, DSM 25857, ICMP 18710, P. methylaliphatogenes, Pyrinomonas methylaliphatogenes Crowe et al. 2014, strain K22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.