STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDM65141.1PFAM: RHS Repeat; Subtilase family; TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies). (2235 aa)    
Predicted Functional Partners:
CDM65379.1
Conserved repeat protein; PFAM: Concanavalin A-like lectin/glucanases superfamily; Domain of unknown function DUF11; TIGRFAM: conserved repeat domain.
  
  0.595
CDM65142.1
Hypothetical protein.
       0.553
CDM65844.1
Subtilisin-like serine protease; PFAM: Domain of unknown function (DUF4214); Subtilase family; Belongs to the peptidase S8 family.
  
     0.532
CDM66533.1
Subtilisin-like serine protease; PFAM: Subtilase family.
  
     0.510
CDM67123.1
PDK repeat-containing protein; PFAM: PKD domain.
 
 
 0.433
CDM64529.1
PEP-CTERM putative exosortase interaction domain-containing protein; PFAM: PEP-CTERM motif; TIGRFAM: PEP-CTERM protein-sorting domain.
   
  0.408
CDM65256.1
PFAM: FecR protein.
   
  0.408
CDM65585.1
Hypothetical protein.
   
  0.408
CDM65839.1
PFAM: Domain of unknown function (DUF4214).
   
  0.408
Your Current Organism:
Pyrinomonas methylaliphatogenes
NCBI taxonomy Id: 454194
Other names: Acidobacteriaceae bacterium K22, DSM 25857, ICMP 18710, P. methylaliphatogenes, Pyrinomonas methylaliphatogenes Crowe et al. 2014, strain K22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.