STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDM65177.1ABC-type polysaccharide/polyol phosphate export systems, permease component; PFAM: ABC-2 type transporter. (287 aa)    
Predicted Functional Partners:
CDM65187.1
ABC-type polysaccharide/polyol phosphate transport system, ATPase component; PFAM: ABC transporter.
 
 0.972
CDM65833.1
ABC-type polysaccharide/polyol phosphate transport system, ATPase component; PFAM: ABC transporter; Wzt C-terminal domain.
 
 0.969
CDM65079.1
ABC-type polysaccharide/polyol phosphate transport system, ATPase component; PFAM: ABC transporter; Wzt C-terminal domain.
 
 0.968
CDM66267.1
ABC-type polysaccharide/polyol phosphate transport system, ATPase component; PFAM: ABC transporter; Wzt C-terminal domain.
 
 0.968
CDM65178.1
N-acetylneuraminate synthase; PFAM: SAF domain; NeuB family.
       0.779
CDM65179.1
PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing.
  
  
 0.562
CDM65176.1
Methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: Methyltransferase domain.
       0.547
CDM65171.1
PFAM: Polysaccharide biosynthesis/export protein; SLBB domain.
  
  
 0.518
CDM65832.1
ABC-type polysaccharide/polyol phosphate export systems, permease component; PFAM: ABC-2 type transporter.
  
  
 
0.510
CDM65175.1
PFAM: TPR repeat.
       0.508
Your Current Organism:
Pyrinomonas methylaliphatogenes
NCBI taxonomy Id: 454194
Other names: Acidobacteriaceae bacterium K22, DSM 25857, ICMP 18710, P. methylaliphatogenes, Pyrinomonas methylaliphatogenes Crowe et al. 2014, strain K22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.