STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDM65259.1Putative hydrolase, CocE/NonD family; PFAM: X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain; X-Pro dipeptidyl-peptidase (S15 family); TIGRFAM: putative hydrolase, CocE/NonD family. (630 aa)    
Predicted Functional Partners:
CDM64981.1
PFAM: Zinc carboxypeptidase.
 
     0.559
CDM65257.1
Amidohydrolase, imidazolonepropionase; PFAM: Amidohydrolase.
       0.527
CDM65258.1
Amidohydrolase, imidazolonepropionase; PFAM: Amidohydrolase.
       0.527
CDM66743.1
Arylsulfatase A family protein; PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase.
  
     0.522
CDM64569.1
Hypothetical protein.
  
     0.484
CDM66811.1
PFAM: Carboxypeptidase regulatory-like domain.
  
     0.445
CDM66937.1
Enterochelin esterase-like enzyme; PFAM: Putative esterase.
  
     0.432
Your Current Organism:
Pyrinomonas methylaliphatogenes
NCBI taxonomy Id: 454194
Other names: Acidobacteriaceae bacterium K22, DSM 25857, ICMP 18710, P. methylaliphatogenes, Pyrinomonas methylaliphatogenes Crowe et al. 2014, strain K22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.