STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDM65547.1Endo-beta-mannanase; PFAM: Sugar-binding cellulase-like. (409 aa)    
Predicted Functional Partners:
CDM65546.1
Mannose-6-phosphate isomerase, type 2; PFAM: Mannose-6-phosphate isomerase; Glycosyl transferases group 1.
 
     0.624
CDM65528.1
Hypothetical protein.
    
 0.620
CDM65028.1
Alpha-galactosidase; PFAM: NPCBM/NEW2 domain; Melibiase.
    
  0.587
CDM67132.1
Endoglucanase; PFAM: Cellulase (glycosyl hydrolase family 5); Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
 0.576
CDM65545.1
Predicted glycosylase; PFAM: Domain of unknown function (DUF377).
 
     0.574
CDM65548.1
Hypothetical protein.
       0.485
CDM64320.1
PFAM: Heparinase II/III-like protein.
    
  0.429
CDM64324.1
PFAM: Heparinase II/III-like protein.
    
  0.429
CDM65544.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
 
     0.411
Your Current Organism:
Pyrinomonas methylaliphatogenes
NCBI taxonomy Id: 454194
Other names: Acidobacteriaceae bacterium K22, DSM 25857, ICMP 18710, P. methylaliphatogenes, Pyrinomonas methylaliphatogenes Crowe et al. 2014, strain K22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.