STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDM65602.1Periplasmic component of the Tol biopolymer transport system; PFAM: Bacterial Ig-like domain (group 2); WD40-like Beta Propeller Repeat; Lamin Tail Domain; TIGRFAM: Solibacter uncharacterized C-terminal domain. (1558 aa)    
Predicted Functional Partners:
CDM65966.1
Competence/damage-inducible protein cinA; PFAM: Probable molybdopterin binding domain; Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA N-terminal domain; competence/damage-inducible protein CinA C-terminal domain; molybdenum cofactor synthesis domain.
  
 
  0.679
CDM65601.1
cAMP-binding protein; PFAM: Crp-like helix-turn-helix domain; Cyclic nucleotide-binding domain.
       0.645
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.626
CDM66952.1
Outer membrane receptor protein; PFAM: TonB-dependent Receptor Plug Domain; Carboxypeptidase regulatory-like domain.
  
     0.471
CDM65578.1
PFAM: Zinc carboxypeptidase.
  
     0.425
CDM65600.1
Hypothetical protein.
       0.421
CDM64164.1
PFAM: Protein of unknown function (DUF433).
  
     0.404
CDM65603.1
Hypothetical protein.
       0.404
Your Current Organism:
Pyrinomonas methylaliphatogenes
NCBI taxonomy Id: 454194
Other names: Acidobacteriaceae bacterium K22, DSM 25857, ICMP 18710, P. methylaliphatogenes, Pyrinomonas methylaliphatogenes Crowe et al. 2014, strain K22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.