Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDM65746.1 | CDM65747.1 | PYK22_01753 | PYK22_01754 | PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily. | Hypothetical protein. | 0.590 |
CDM65746.1 | CDM65748.1 | PYK22_01753 | PYK22_01755 | PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily. | Trypsin-like serine protease with C-terminal PDZ domain. | 0.482 |
CDM65746.1 | CDM65749.1 | PYK22_01753 | PYK22_01756 | PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily. | Hypothetical protein; PFAM: Circularly permuted ATP-grasp type 2. | 0.482 |
CDM65747.1 | CDM65746.1 | PYK22_01754 | PYK22_01753 | Hypothetical protein. | PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily. | 0.590 |
CDM65747.1 | CDM65748.1 | PYK22_01754 | PYK22_01755 | Hypothetical protein. | Trypsin-like serine protease with C-terminal PDZ domain. | 0.623 |
CDM65747.1 | CDM65749.1 | PYK22_01754 | PYK22_01756 | Hypothetical protein. | Hypothetical protein; PFAM: Circularly permuted ATP-grasp type 2. | 0.623 |
CDM65747.1 | CDM65750.1 | PYK22_01754 | PYK22_01757 | Hypothetical protein. | PilZ domain-containing protein; PFAM: PilZ domain. | 0.482 |
CDM65748.1 | CDM65746.1 | PYK22_01755 | PYK22_01753 | Trypsin-like serine protease with C-terminal PDZ domain. | PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily. | 0.482 |
CDM65748.1 | CDM65747.1 | PYK22_01755 | PYK22_01754 | Trypsin-like serine protease with C-terminal PDZ domain. | Hypothetical protein. | 0.623 |
CDM65748.1 | CDM65749.1 | PYK22_01755 | PYK22_01756 | Trypsin-like serine protease with C-terminal PDZ domain. | Hypothetical protein; PFAM: Circularly permuted ATP-grasp type 2. | 0.773 |
CDM65748.1 | CDM65750.1 | PYK22_01755 | PYK22_01757 | Trypsin-like serine protease with C-terminal PDZ domain. | PilZ domain-containing protein; PFAM: PilZ domain. | 0.590 |
CDM65748.1 | CDM65751.1 | PYK22_01755 | PYK22_01758 | Trypsin-like serine protease with C-terminal PDZ domain. | Carboxylate-amine ligase, YbdK family; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. | 0.442 |
CDM65749.1 | CDM65746.1 | PYK22_01756 | PYK22_01753 | Hypothetical protein; PFAM: Circularly permuted ATP-grasp type 2. | PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily. | 0.482 |
CDM65749.1 | CDM65747.1 | PYK22_01756 | PYK22_01754 | Hypothetical protein; PFAM: Circularly permuted ATP-grasp type 2. | Hypothetical protein. | 0.623 |
CDM65749.1 | CDM65748.1 | PYK22_01756 | PYK22_01755 | Hypothetical protein; PFAM: Circularly permuted ATP-grasp type 2. | Trypsin-like serine protease with C-terminal PDZ domain. | 0.773 |
CDM65749.1 | CDM65750.1 | PYK22_01756 | PYK22_01757 | Hypothetical protein; PFAM: Circularly permuted ATP-grasp type 2. | PilZ domain-containing protein; PFAM: PilZ domain. | 0.590 |
CDM65749.1 | CDM65751.1 | PYK22_01756 | PYK22_01758 | Hypothetical protein; PFAM: Circularly permuted ATP-grasp type 2. | Carboxylate-amine ligase, YbdK family; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. | 0.816 |
CDM65750.1 | CDM65747.1 | PYK22_01757 | PYK22_01754 | PilZ domain-containing protein; PFAM: PilZ domain. | Hypothetical protein. | 0.482 |
CDM65750.1 | CDM65748.1 | PYK22_01757 | PYK22_01755 | PilZ domain-containing protein; PFAM: PilZ domain. | Trypsin-like serine protease with C-terminal PDZ domain. | 0.590 |
CDM65750.1 | CDM65749.1 | PYK22_01757 | PYK22_01756 | PilZ domain-containing protein; PFAM: PilZ domain. | Hypothetical protein; PFAM: Circularly permuted ATP-grasp type 2. | 0.590 |
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