STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDM65919.1Predicted dehydrogenase; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Zinc-binding dehydrogenase. (720 aa)    
Predicted Functional Partners:
CDM64612.1
Sugar phosphate isomerase/epimerase; PFAM: Xylose isomerase-like TIM barrel.
 
 
 0.902
CDM64610.1
Sugar phosphate isomerase/epimerase; PFAM: Xylose isomerase-like TIM barrel.
  
 
 0.870
CDM64463.1
Predicted dehydrogenase; PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold; Zinc-binding dehydrogenase.
 
0.798
CDM66581.1
PFAM: Heparinase II/III-like protein.
 
     0.796
CDM66591.1
Predicted dehydrogenase; PFAM: Oxidoreductase family, NAD-binding Rossmann fold.
 
 
0.793
CDM66950.1
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit; PFAM: Dehydrogenase E1 component; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain.
  
 
 0.775
CDM64824.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
 
 0.774
CDM66250.1
PFAM: Heparinase II/III-like protein.
 
     0.764
CDM64647.1
PFAM: Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family.
  
 0.742
CDM64748.1
PFAM: Aldehyde dehydrogenase family.
  
 0.742
Your Current Organism:
Pyrinomonas methylaliphatogenes
NCBI taxonomy Id: 454194
Other names: Acidobacteriaceae bacterium K22, DSM 25857, ICMP 18710, P. methylaliphatogenes, Pyrinomonas methylaliphatogenes Crowe et al. 2014, strain K22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.