STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDM66101.1Outer membrane cobalamin receptor protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Carboxypeptidase regulatory-like domain. (730 aa)    
Predicted Functional Partners:
CDM65730.1
PFAM: Zinc carboxypeptidase.
  
     0.609
CDM65305.1
Predicted aminopeptidase; PFAM: PA domain; Peptidase family M28.
  
     0.602
CDM66102.1
Predicted protease with the C-terminal PDZ domain; PFAM: Peptidase MA superfamily.
 
     0.578
CDM64995.1
TonB family protein; PFAM: Gram-negative bacterial TonB protein C-terminal; TIGRFAM: TonB family C-terminal domain.
  
 
   0.561
CDM65509.1
TonB family protein; PFAM: Gram-negative bacterial TonB protein C-terminal; TIGRFAM: TonB family C-terminal domain.
  
 
   0.550
CDM67141.1
Predicted aminopeptidase; PFAM: Peptidase family M28.
  
     0.538
CDM64359.1
PFAM: Prolyl oligopeptidase family; Dipeptidyl peptidase IV (DPP IV) N-terminal region.
  
 
   0.521
CDM66100.1
Hypothetical protein.
       0.494
CDM64697.1
Outer membrane receptor protein; PFAM: Carboxypeptidase regulatory-like domain.
  
  
  0.486
CDM64807.1
ATPase involved in chromosome partitioning; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
    
   0.483
Your Current Organism:
Pyrinomonas methylaliphatogenes
NCBI taxonomy Id: 454194
Other names: Acidobacteriaceae bacterium K22, DSM 25857, ICMP 18710, P. methylaliphatogenes, Pyrinomonas methylaliphatogenes Crowe et al. 2014, strain K22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.