STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDM66174.1ABC-type transport system involved in resistance to organic solvents, periplasmic component; PFAM: mce related protein. (381 aa)    
Predicted Functional Partners:
CDM66176.1
PFAM: Permease; TIGRFAM: conserved hypothetical integral membrane protein; Belongs to the MlaE permease family.
 
 0.995
CDM66175.1
ABC-type transport system involved in resistance to organic solvents, ATPase component; PFAM: ABC transporter.
 
 0.993
CDM65286.1
Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); PFAM: STAS domain.
  
  0.960
CDM66889.1
PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
  
  0.960
CDM65633.1
Flagellar motor protein; PFAM: OmpA family; Membrane MotB of proton-channel complex MotA/MotB.
   
   0.718
CDM65770.1
Beta-barrel assembly machine subunit BamA; PFAM: Surface antigen variable number repeat; Surface antigen; TIGRFAM: outer membrane protein assembly complex, YaeT protein.
 
    0.666
CDM66343.1
Beta-barrel assembly machine subunit BamA; PFAM: Surface antigen variable number repeat; Surface antigen; TIGRFAM: outer membrane protein assembly complex, YaeT protein.
 
    0.658
CDM64107.1
Gluconolactonase.
  
     0.655
CDM65460.1
Outer membrane protein/peptidoglycan-associated (lipo)protein; PFAM: PKD domain.
 
 
  0.619
CDM65684.1
PFAM: Outer membrane efflux protein.
 
     0.600
Your Current Organism:
Pyrinomonas methylaliphatogenes
NCBI taxonomy Id: 454194
Other names: Acidobacteriaceae bacterium K22, DSM 25857, ICMP 18710, P. methylaliphatogenes, Pyrinomonas methylaliphatogenes Crowe et al. 2014, strain K22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.