STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDM66259.1PFAM: Methyltransferase domain; Glycosyl transferase family 2. (538 aa)    
Predicted Functional Partners:
CDM66258.1
Predicted xylanase/chitin deacetylase; PFAM: Polysaccharide deacetylase.
 
  0.931
CDM66255.1
Predicted glycosyltransferase; PFAM: Glycosyl transferase family 2.
 
  
  0.815
CDM66261.1
PFAM: Glycosyl transferase family 2.
 
 
0.771
CDM66260.1
Predicted glycosyltransferase; PFAM: Glycosyl transferase family 2.
 
  
  0.653
CDM66266.1
PFAM: Glycosyl transferase family 2.
 
 
0.588
CDM65088.1
Predicted glycosyltransferase; PFAM: Glycosyl transferase family 2.
 
 
0.528
CDM64150.1
PFAM: Glycosyl hydrolases family 18; Polysaccharide deacetylase; Glycosyltransferase like family 2.
 
 
0.518
CDM66262.1
PFAM: Glycosyl transferase family 2.
 
  
 
0.512
CDM66257.1
Hypothetical protein.
       0.443
CDM66256.1
PFAM: Methyltransferase domain.
  
    0.417
Your Current Organism:
Pyrinomonas methylaliphatogenes
NCBI taxonomy Id: 454194
Other names: Acidobacteriaceae bacterium K22, DSM 25857, ICMP 18710, P. methylaliphatogenes, Pyrinomonas methylaliphatogenes Crowe et al. 2014, strain K22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.