STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDM66264.1PFAM: Glycosyl transferase family 2. (334 aa)    
Predicted Functional Partners:
CDM66255.1
Predicted glycosyltransferase; PFAM: Glycosyl transferase family 2.
 
  
  0.740
CDM66261.1
PFAM: Glycosyl transferase family 2.
 
 
0.590
CDM66265.1
Hypothetical protein.
       0.568
CDM65088.1
Predicted glycosyltransferase; PFAM: Glycosyl transferase family 2.
 
 
0.529
CDM64150.1
PFAM: Glycosyl hydrolases family 18; Polysaccharide deacetylase; Glycosyltransferase like family 2.
 
 
0.525
CDM66263.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1; Glycosyl transferase 4-like domain.
  
    0.525
CDM66266.1
PFAM: Glycosyl transferase family 2.
 
 
0.490
CDM66247.1
Methyltransferase, FkbM family; PFAM: Methyltransferase FkbM domain; TIGRFAM: methyltransferase, FkbM family.
 
      0.433
CDM66259.1
PFAM: Methyltransferase domain; Glycosyl transferase family 2.
 
    
0.407
Your Current Organism:
Pyrinomonas methylaliphatogenes
NCBI taxonomy Id: 454194
Other names: Acidobacteriaceae bacterium K22, DSM 25857, ICMP 18710, P. methylaliphatogenes, Pyrinomonas methylaliphatogenes Crowe et al. 2014, strain K22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.