STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDM66271.1Lipid A core-O-antigen ligase-like enyme; PFAM: O-antigen ligase like membrane protein; TIGRFAM: probable O-glycosylation ligase, exosortase A-associated. (525 aa)    
Predicted Functional Partners:
CDM65088.1
Predicted glycosyltransferase; PFAM: Glycosyl transferase family 2.
  
  
 0.858
CDM65908.1
PFAM: Bacterial sugar transferase; CoA-binding domain; TIGRFAM: sugar transferase, PEP-CTERM system associated; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
  
 0.818
CDM66599.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: Bacterial sugar transferase; CoA-binding domain; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; Undecaprenyl-phosphate galactose phosphotransferase, WbaP; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
  
 0.730
CDM66270.1
PFAM: Glycosyl transferase family 2.
 
    0.685
CDM65096.1
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase.
  
     0.656
CDM66269.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1; Glycosyl transferase 4-like domain.
  
 
  0.647
CDM65911.1
Uncharacterized protein involved in exopolysaccharide biosynthesis; PFAM: Chain length determinant protein; G-rich domain on putative tyrosine kinase; TIGRFAM: polysaccharide chain length determinant protein, PEP-CTERM locus subfamily.
 
  
 0.646
CDM65915.1
PFAM: Transmembrane exosortase (Exosortase_EpsH); TIGRFAM: exosortase/archaeosortase family protein; exosortase.
 
     0.606
CDM65460.1
Outer membrane protein/peptidoglycan-associated (lipo)protein; PFAM: PKD domain.
  
     0.599
CDM66276.1
Lipid A core-O-antigen ligase-like enyme; PFAM: O-Antigen ligase.
  
  
  0.594
Your Current Organism:
Pyrinomonas methylaliphatogenes
NCBI taxonomy Id: 454194
Other names: Acidobacteriaceae bacterium K22, DSM 25857, ICMP 18710, P. methylaliphatogenes, Pyrinomonas methylaliphatogenes Crowe et al. 2014, strain K22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.