STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDM66535.1Sulfite oxidase-like oxidoreductase; PFAM: Oxidoreductase molybdopterin binding domain. (230 aa)    
Predicted Functional Partners:
CDM66520.1
Quinol:cytochrome c oxidoreductase iron-sulfur protein precursor; PFAM: 4Fe-4S dicluster domain.
    
 0.694
CDM66513.1
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 0.689
cysC-2
Sulfate adenylyltransferase; Catalyzes the synthesis of activated sulfate.
     
 0.685
CDM66534.1
Hypothetical protein.
       0.668
CDM66536.1
PFAM: Mechanosensitive ion channel.
       0.668
CDM64872.1
Zn-dependent hydrolase, glyoxylase; PFAM: Metallo-beta-lactamase superfamily; Rhodanese-like domain.
   
 
 0.653
CDM66521.1
Quinol:cytochrome c oxidoreductase pentaheme cytochrome subunit; PFAM: Cytochrome c7.
  
 0.587
CDM66517.1
PFAM: Cytochrome C oxidase, cbb3-type, subunit III.
    
 0.584
CDM66518.1
Quinol:cytochrome c oxidoreductase membrane protein; PFAM: Protein of unknown function (DUF3341).
    
 0.584
CDM66157.1
Sulfite reductase (ferredoxin); PFAM: ThiS family; Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain.
 
 
 0.556
Your Current Organism:
Pyrinomonas methylaliphatogenes
NCBI taxonomy Id: 454194
Other names: Acidobacteriaceae bacterium K22, DSM 25857, ICMP 18710, P. methylaliphatogenes, Pyrinomonas methylaliphatogenes Crowe et al. 2014, strain K22
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