STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDM66567.1Zn-dependent hydrolase, glyoxylase; PFAM: Metallo-beta-lactamase superfamily; NUDIX domain. (580 aa)    
Predicted Functional Partners:
CDM66173.1
MoaD family protein; PFAM: ThiS family; MoeZ/MoeB domain; Rhodanese-like domain; ThiF family; TIGRFAM: MoaD family protein, archaeal.
  
 0.787
CDM64723.1
AMP-forming long-chain acyl-CoA synthetase; PFAM: Phosphopantetheine attachment site; Male sterility protein; Acyltransferase; AMP-binding enzyme; AMP-binding enzyme C-terminal domain; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases.
 
 
 
 0.700
CDM64724.1
PFAM: Domain of unknown function (DUF2088).
  
  
  0.646
CDM66157.1
Sulfite reductase (ferredoxin); PFAM: ThiS family; Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain.
     
 0.638
rpsU
PFAM: Ribosomal protein S21; TIGRFAM: ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.
       0.555
CDM66566.1
Mg-chelatase subunit ChlI.
       0.550
CDM66210.1
Hypothetical protein.
  
     0.544
CDM66438.1
Rhodanese-related sulfurtransferase; PFAM: Rhodanese-like domain.
  
 0.501
CDM64513.1
PFAM: OPT oligopeptide transporter protein; TIGRFAM: putative oligopeptide transporter, OPT family.
  
    0.443
CDM66990.1
Hypothetical protein.
  
     0.428
Your Current Organism:
Pyrinomonas methylaliphatogenes
NCBI taxonomy Id: 454194
Other names: Acidobacteriaceae bacterium K22, DSM 25857, ICMP 18710, P. methylaliphatogenes, Pyrinomonas methylaliphatogenes Crowe et al. 2014, strain K22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.