STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDM66679.1Indolepyruvate ferredoxin oxidreductase, alpha/beta subunit; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (91 aa)    
Predicted Functional Partners:
CDM64719.1
NAD(FAD)-dependent dehydrogenase; PFAM: FAD dependent oxidoreductase.
  
 0.856
CDM65068.1
Succinate dehydrogenase subunit A; PFAM: FAD binding domain; Fumarate reductase flavoprotein C-term; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup.
  
 0.856
cysC-2
Sulfate adenylyltransferase; Catalyzes the synthesis of activated sulfate.
  
 
 0.812
CDM66520.1
Quinol:cytochrome c oxidoreductase iron-sulfur protein precursor; PFAM: 4Fe-4S dicluster domain.
  
 
 0.782
CDM66926.1
NADPH-dependent glutamate synthase beta chain-like oxidoreductase; PFAM: Oxidoreductase NAD-binding domain.
 
 
 0.754
CDM67034.1
Glutamate synthase (NADH) large subunit; PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II.
     
 0.723
CDM66680.1
Hypothetical protein.
       0.689
CDM66448.1
3-isopropylmalate dehydratase large subunit; PFAM: Aconitase C-terminal domain; Aconitase family (aconitate hydratase).
  
 
  0.685
cysH
Phosphoadenylylsulfate reductase (thioredoxin); Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
 
  
 0.674
CDM64434.1
NADH dehydrogenase subunit E; PFAM: Thioredoxin-like [2Fe-2S] ferredoxin; TIGRFAM: NADH-quinone oxidoreductase, E subunit.
    
 0.656
Your Current Organism:
Pyrinomonas methylaliphatogenes
NCBI taxonomy Id: 454194
Other names: Acidobacteriaceae bacterium K22, DSM 25857, ICMP 18710, P. methylaliphatogenes, Pyrinomonas methylaliphatogenes Crowe et al. 2014, strain K22
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