STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDM66707.1PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase. (357 aa)    
Predicted Functional Partners:
CDM66709.1
Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein; PFAM: FAD binding domain in molybdopterin dehydrogenase; CO dehydrogenase flavoprotein C-terminal domain.
    
  0.719
CDM66708.1
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein; PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain.
       0.714
CDM64173.1
Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; PFAM: Class II Aldolase and Adducin N-terminal domain; short chain dehydrogenase; TIGRFAM: rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
   
  0.685
CDM66710.1
PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain.
       0.656
CDM66711.1
Uncharacterized MobA-like protein; PFAM: MobA-like NTP transferase domain.
       0.656
CDM66712.1
Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family; PFAM: XdhC Rossmann domain; XdhC and CoxI family.
       0.656
CDM66429.1
PFAM: Enoyl-CoA hydratase/isomerase family; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain.
   
 
 0.654
lipB
Lipoate-protein ligase B; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.
    
  0.626
CDM64523.1
PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: zinc-binding alcohol dehydrogenase family protein.
  
  
 
0.512
CDM66713.1
PFAM: Uncharacterized protein conserved in bacteria (DUF2255).
       0.490
Your Current Organism:
Pyrinomonas methylaliphatogenes
NCBI taxonomy Id: 454194
Other names: Acidobacteriaceae bacterium K22, DSM 25857, ICMP 18710, P. methylaliphatogenes, Pyrinomonas methylaliphatogenes Crowe et al. 2014, strain K22
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