STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDM66811.1PFAM: Carboxypeptidase regulatory-like domain. (115 aa)    
Predicted Functional Partners:
CDM65779.1
Outer membrane receptor for ferrienterochelin and colicins; PFAM: TonB-dependent Receptor Plug Domain; Carboxypeptidase regulatory-like domain.
  
     0.720
CDM66695.1
Hypothetical protein.
  
     0.686
CDM64888.1
Hypothetical protein.
  
     0.673
CDM64852.1
Outer membrane receptor for ferrienterochelin and colicins; PFAM: TonB-dependent Receptor Plug Domain; Carboxypeptidase regulatory-like domain.
  
     0.615
CDM66813.1
PFAM: von Willebrand factor type A domain; TIGRFAM: VWFA-related Acidobacterial domain.
 
     0.610
CDM65532.1
Hypothetical protein.
  
     0.598
CDM65730.1
PFAM: Zinc carboxypeptidase.
  
     0.592
CDM64114.1
Outer membrane receptor protein; PFAM: Carboxypeptidase regulatory-like domain.
  
     0.585
CDM64183.1
PFAM: Carboxypeptidase regulatory-like domain.
  
     0.553
CDM64333.1
Hypothetical protein.
  
     0.533
Your Current Organism:
Pyrinomonas methylaliphatogenes
NCBI taxonomy Id: 454194
Other names: Acidobacteriaceae bacterium K22, DSM 25857, ICMP 18710, P. methylaliphatogenes, Pyrinomonas methylaliphatogenes Crowe et al. 2014, strain K22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.