STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDM66830.1PFAM: Glycosyl hydrolases family 31; Galactose mutarotase-like. (829 aa)    
Predicted Functional Partners:
CDM66831.1
Sugar kinase, ribokinase; PFAM: pfkB family carbohydrate kinase.
 
 
 0.663
CDM66829.1
PFAM: Cytochrome P450.
 
  
 0.643
CDM64312.1
PFAM: 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase.
    
 0.591
CDM64360.1
Sugar kinase, ribokinase; PFAM: pfkB family carbohydrate kinase.
   
 
 0.550
CDM64104.1
PFAM: Glycosyl-hydrolase 97 N-terminal; Glycoside hydrolase 97; Glycosyl-hydrolase 97 C-terminal, oligomerisation.
  
  
  0.547
CDM64596.1
N-acetyl-beta-hexosaminidase; PFAM: Glycosyl hydrolase family 20, catalytic domain; Glycosyl hydrolase family 20, domain 2.
 
 
 0.545
CDM65701.1
PFAM: Aconitase C-terminal domain; Aconitase family (aconitate hydratase); TIGRFAM: aconitate hydratase 1.
    
   0.503
CDM65028.1
Alpha-galactosidase; PFAM: NPCBM/NEW2 domain; Melibiase.
 
  
 0.454
CDM64456.1
PFAM: Beta-galactosidase trimerisation domain; Beta-galactosidase.
 
 
 0.439
CDM65785.1
Thiol-disulfide isomerase-like thioredoxin; PFAM: Thioredoxin-like; NHL repeat.
  
 
   0.434
Your Current Organism:
Pyrinomonas methylaliphatogenes
NCBI taxonomy Id: 454194
Other names: Acidobacteriaceae bacterium K22, DSM 25857, ICMP 18710, P. methylaliphatogenes, Pyrinomonas methylaliphatogenes Crowe et al. 2014, strain K22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.