STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDM66871.1AMP-forming long-chain acyl-CoA synthetase; PFAM: AMP-binding enzyme. (632 aa)    
Predicted Functional Partners:
CDM64136.1
Non-ribosomal peptide synthase, dehydrogenase domain-containing protein; PFAM: Male sterility protein.
   
  0.878
CDM64723.1
AMP-forming long-chain acyl-CoA synthetase; PFAM: Phosphopantetheine attachment site; Male sterility protein; Acyltransferase; AMP-binding enzyme; AMP-binding enzyme C-terminal domain; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases.
 
  
0.832
CDM66162.1
AMP-forming long-chain acyl-CoA synthetase; PFAM: Phosphopantetheine attachment site; Acyltransferase; AMP-binding enzyme; AMP-binding enzyme C-terminal domain.
 
  
0.772
CDM64199.1
PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain.
   
  0.573
CDM66948.1
PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain.
   
  0.573
CDM66963.1
PFAM: Acyl-CoA dehydrogenase, N-terminal domain.
   
  0.573
CDM64482.1
PFAM: Male sterility protein.
   
  0.532
CDM66261.1
PFAM: Glycosyl transferase family 2.
    
 0.517
CDM66266.1
PFAM: Glycosyl transferase family 2.
    
 0.517
CDM65720.1
Ankyrin repeat-containing protein; PFAM: Ankyrin repeats (many copies); Ankyrin repeats (3 copies).
   
  0.497
Your Current Organism:
Pyrinomonas methylaliphatogenes
NCBI taxonomy Id: 454194
Other names: Acidobacteriaceae bacterium K22, DSM 25857, ICMP 18710, P. methylaliphatogenes, Pyrinomonas methylaliphatogenes Crowe et al. 2014, strain K22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.