STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDM67068.1Carbon dioxide concentrating mechanism/carboxysome shell protein; PFAM: Ethanolamine utilisation protein EutN/carboxysome. (96 aa)    
Predicted Functional Partners:
CDM67065.1
Carbon dioxide concentrating mechanism/carboxysome shell protein; PFAM: BMC domain.
 
 
 
 0.969
CDM66484.1
Carbon dioxide concentrating mechanism/carboxysome shell protein; PFAM: BMC domain.
 
 
 
 0.893
CDM66490.1
Carbon dioxide concentrating mechanism/carboxysome shell protein; PFAM: BMC domain.
 
 
 
 0.893
CDM67067.1
Carbon dioxide concentrating mechanism/carboxysome shell protein; PFAM: Ethanolamine utilisation protein EutN/carboxysome.
 
    
0.829
CDM66488.1
Carbon dioxide concentrating mechanism/carboxysome shell protein; PFAM: Ethanolamine utilisation protein EutN/carboxysome.
  
     0.775
CDM67066.1
Carbon dioxide concentrating mechanism/carboxysome shell protein; PFAM: Ethanolamine utilisation protein EutN/carboxysome.
 
    
0.775
CDM67069.1
Hypothetical protein.
       0.773
CDM67064.1
Selenocysteine lyase; PFAM: Aminotransferase class-V.
       0.434
Your Current Organism:
Pyrinomonas methylaliphatogenes
NCBI taxonomy Id: 454194
Other names: Acidobacteriaceae bacterium K22, DSM 25857, ICMP 18710, P. methylaliphatogenes, Pyrinomonas methylaliphatogenes Crowe et al. 2014, strain K22
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