STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CISG_02997Dihydroceramide delta-4 desaturase. (81 aa)    
Predicted Functional Partners:
CISG_00037
Uncharacterized protein.
    
 0.882
CISG_00642
UDP-glucose ceramide glucosyltransferase.
   
 
 0.875
CISG_03153
Inositol phosphosphingolipids phospholipase C.
     
 0.868
CISG_04094
Sphingosine N-acyltransferase lac1.
    
 0.848
CISG_02941
Longevity-assurance protein.
    
 0.848
CISG_09935
3-ketodihydrosphingosine reductase tsc10.
   
 
 0.837
CISG_04623
3-ketodihydrosphingosine reductase TSC10.
   
 
 0.837
CISG_01907
Neutral ceramidase.
     
 0.831
CISG_02832
acidPPc domain-containing protein.
     
 0.831
CISG_03473
NAAA-beta domain-containing protein.
     
 0.818
Your Current Organism:
Coccidioides immitis RMSCC3703
NCBI taxonomy Id: 454286
Other names: C. immitis RMSCC 3703, Coccidioides immitis RMSCC 3703
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