STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CISG_03300Pre-mRNA-splicing factor prp1. (164 aa)    
Predicted Functional Partners:
CISG_03702
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28.
   
 0.969
CISG_04411
Pre-mRNA splicing factor.
   
 0.968
CISG_02670
Elongation factor 2.
   
 0.966
CISG_06493
Pre-mRNA processing splicing factor 8.
   
 0.965
CISG_01695
Uncharacterized protein.
   
 0.964
CISG_07530
Cell cycle control protein cwf17.
   
 0.961
CISG_09918
Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family.
    
 0.959
CISG_01702
Uncharacterized protein.
   
 0.959
CISG_03815
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.952
CISG_03982
MFAP1 domain-containing protein.
   
 0.951
Your Current Organism:
Coccidioides immitis RMSCC3703
NCBI taxonomy Id: 454286
Other names: C. immitis RMSCC 3703, Coccidioides immitis RMSCC 3703
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.