STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CISG_03917Uncharacterized protein. (706 aa)    
Predicted Functional Partners:
CISG_10144
RRM domain-containing protein.
    
 
 0.964
CISG_00424
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.948
CISG_06093
DNA-binding protein SMUBP-2.
   
 
 0.928
CISG_06094
SEN1_N domain-containing protein.
   
 
 0.928
CISG_05139
mRNA cap methyltransferase.
   
 
 0.895
CISG_05010
Nuclear cap-binding protein subunit 2.
   
 
 0.889
CISG_05355
Poly(A) polymerase Cid14, variant.
    
 
 0.883
CISG_07213
Nuclear cap binding protein subunit 1.
   
 
 0.877
CISG_09288
Uncharacterized protein.
    
 
 0.819
CISG_08425
Uncharacterized protein.
   
 
 0.693
Your Current Organism:
Coccidioides immitis RMSCC3703
NCBI taxonomy Id: 454286
Other names: C. immitis RMSCC 3703, Coccidioides immitis RMSCC 3703
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