STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CISG_03177NPL domain-containing protein. (260 aa)    
Predicted Functional Partners:
CISG_03178
Peptidylprolyl isomerase.
 
      0.900
CISG_00136
Nucleolar protein 5A.
   
 
 0.864
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
   0.860
CISG_05020
E3 ubiquitin-protein ligase MARCH6.
    
 
 0.843
CISG_10345
Brix domain-containing protein 1.
   
 
 0.831
CISG_06862
Cell division cycle protein 48; Belongs to the AAA ATPase family.
   
   0.828
CISG_06047
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
   0.764
CISG_04257
Wos2.
   
 0.761
CISG_09257
ATP-dependent RNA helicase has1; Belongs to the DEAD box helicase family.
   
 0.746
CISG_01869
AdoMet-dependent rRNA methyltransferase spb1.
   
   0.741
Your Current Organism:
Coccidioides immitis RMSCC3703
NCBI taxonomy Id: 454286
Other names: C. immitis RMSCC 3703, Coccidioides immitis RMSCC 3703
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.