CISG_09902 protein (Coccidioides immitis RMSCC3703)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CISG_09902

Ferric oxidoreductase domain-containing protein. (235 aa)

Predicted Functional Partners:

CISG_03960

0.793

CISG_02404

0.656

CISG_08385

0.625

CISG_04165

0.549

CISG_03432

0.529

CISG_09005

0.527

CISG_08914

0.518

CISG_07044

0.464

CISG_08648

0.464

CISG_07300

0.426

Your Current Organism:

Coccidioides immitis RMSCC3703

NCBI taxonomy Id: 454286
Other names: C. immitis RMSCC 3703, Coccidioides immitis RMSCC 3703

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CISG_02404	CISG_03960	A0A0J8R9Q8	A0A0J8TJS7	Neutrophil cytosolic factor 2.	Uncharacterized protein.	0.578
CISG_02404	CISG_04165	A0A0J8R9Q8	A0A0J8TND3	Neutrophil cytosolic factor 2.	Bem1p.	0.884
CISG_02404	CISG_07044	A0A0J8R9Q8	A0A0J8QZ98	Neutrophil cytosolic factor 2.	Cell division control protein 42.	0.792
CISG_02404	CISG_08385	A0A0J8R9Q8	A0A0J8R579	Neutrophil cytosolic factor 2.	Ankyrin repeat domain containing protein 28.	0.537
CISG_02404	CISG_08648	A0A0J8R9Q8	A0A0J8R8A7	Neutrophil cytosolic factor 2.	Cell division control protein 42.	0.792
CISG_02404	CISG_09902	A0A0J8R9Q8	A0A0J8QP11	Neutrophil cytosolic factor 2.	Ferric oxidoreductase domain-containing protein.	0.656
CISG_03432	CISG_03960	A0A0J8THL0	A0A0J8TJS7	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment.	Uncharacterized protein.	0.599
CISG_03432	CISG_07044	A0A0J8THL0	A0A0J8QZ98	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment.	Cell division control protein 42.	0.433
CISG_03432	CISG_07300	A0A0J8THL0	A0A0J8R5K2	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment.	Uncharacterized protein.	0.576
CISG_03432	CISG_08385	A0A0J8THL0	A0A0J8R579	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment.	Ankyrin repeat domain containing protein 28.	0.760
CISG_03432	CISG_08648	A0A0J8THL0	A0A0J8R8A7	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment.	Cell division control protein 42.	0.433
CISG_03432	CISG_09902	A0A0J8THL0	A0A0J8QP11	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment.	Ferric oxidoreductase domain-containing protein.	0.529
CISG_03960	CISG_02404	A0A0J8TJS7	A0A0J8R9Q8	Uncharacterized protein.	Neutrophil cytosolic factor 2.	0.578
CISG_03960	CISG_03432	A0A0J8TJS7	A0A0J8THL0	Uncharacterized protein.	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment.	0.599
CISG_03960	CISG_04165	A0A0J8TJS7	A0A0J8TND3	Uncharacterized protein.	Bem1p.	0.696
CISG_03960	CISG_07044	A0A0J8TJS7	A0A0J8QZ98	Uncharacterized protein.	Cell division control protein 42.	0.998
CISG_03960	CISG_07300	A0A0J8TJS7	A0A0J8R5K2	Uncharacterized protein.	Uncharacterized protein.	0.946
CISG_03960	CISG_08385	A0A0J8TJS7	A0A0J8R579	Uncharacterized protein.	Ankyrin repeat domain containing protein 28.	0.999
CISG_03960	CISG_08648	A0A0J8TJS7	A0A0J8R8A7	Uncharacterized protein.	Cell division control protein 42.	0.998
CISG_03960	CISG_09005	A0A0J8TJS7	A0A0J8RAB1	Uncharacterized protein.	Uncharacterized protein.	0.578