STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CISG_00868Uncharacterized protein. (776 aa)    
Predicted Functional Partners:
CISG_05100
Cytochrome c oxidase assembly protein COX15.
    
 0.512
CISG_01816
Uncharacterized protein.
    
 0.512
CISG_01779
Ttaggg repeat-binding factor 1.
    
 0.474
CISG_00677
tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...]
    
 0.474
CISG_06959
Uncharacterized protein.
  
 
   0.463
CISG_04221
Serine/threonine-protein phosphatase.
   
 0.427
CISG_03896
1,4-alpha-glucan-branching enzyme.
   
 
  0.427
CISG_00823
Metallophos domain-containing protein.
    
 0.412
CISG_08626
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
   
 
  0.410
Your Current Organism:
Coccidioides immitis RMSCC3703
NCBI taxonomy Id: 454286
Other names: C. immitis RMSCC 3703, Coccidioides immitis RMSCC 3703
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