STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CISG_04805DRAP deaminase. (474 aa)    
Predicted Functional Partners:
CISG_06844
Pseudouridine synthase.
    
 
 0.898
CISG_05601
23S rRNA (Guanosine-2'-O-)-methyltransferase rlmB.
  
 
 0.881
CISG_07186
tRNA modification GTPase mss1.
  
 
 0.880
CISG_03575
50S ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
   0.876
CISG_01671
50S ribosomal subunit protein L15.
  
   0.869
CISG_04252
60S ribosomal protein L26.
   
   0.863
CISG_01895
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.851
CISG_01077
GTPase EngB.
   
 
 0.840
CISG_09652
50S ribosomal protein L3.
   
 
 0.835
CISG_05313
50S ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.
  
   0.833
Your Current Organism:
Coccidioides immitis RMSCC3703
NCBI taxonomy Id: 454286
Other names: C. immitis RMSCC 3703, Coccidioides immitis RMSCC 3703
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.