STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CISG_05998Pre-mRNA-splicing factor rse1. (168 aa)    
Predicted Functional Partners:
CISG_10410
CID domain-containing protein.
   
 0.999
CISG_08630
Pre-mRNA splicing factor.
   
 0.969
CISG_03961
Spliceosome associated protein 145.
   
 0.964
CISG_03292
RRM domain-containing protein.
    
 0.962
CISG_02829
Sm domain-containing protein.
   
 0.961
CISG_03416
RNA splicing factor PRP9.
   
 0.959
CISG_03815
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.959
CISG_06889
PHD finger protein 5A.
   
 0.959
CISG_05391
U2 small nuclear ribonucleoprotein A.
    
 0.958
CISG_01174
Splicing factor 3a.
   
 0.955
Your Current Organism:
Coccidioides immitis RMSCC3703
NCBI taxonomy Id: 454286
Other names: C. immitis RMSCC 3703, Coccidioides immitis RMSCC 3703
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.