STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CISG_05478CCR4 protein. (611 aa)    
Predicted Functional Partners:
CISG_07689
CCR4-NOT transcription complex subunit 7.
    
 0.995
CISG_04522
CCR4-NOT transcription complex.
    
 0.982
CISG_09512
ATP-dependent RNA helicase dhh1; Belongs to the DEAD box helicase family.
    
 0.970
CISG_02290
VIP2 protein.
    
 0.967
CISG_02286
CUE domain-containing protein.
    
 0.967
CISG_05045
RRM_1 domain-containing protein.
    
 0.965
CISG_05047
Uncharacterized protein.
    
 0.965
CISG_10253
Cell differentiation protein rcd1.
    
 0.964
CISG_10273
Uncharacterized protein.
    
 0.964
CISG_00061
Uncharacterized protein.
    
 0.959
Your Current Organism:
Coccidioides immitis RMSCC3703
NCBI taxonomy Id: 454286
Other names: C. immitis RMSCC 3703, Coccidioides immitis RMSCC 3703
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.