STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CISG_06781Ubiquitin carboxyl-terminal hydrolase. (328 aa)    
Predicted Functional Partners:
CISG_02554
26S proteasome non-ATPase regulatory subunit 4.
    
 0.990
CISG_08285
26S proteasome regulatory subunit RPN11.
   
 0.978
CISG_08299
26S proteasome non-ATPase regulatory subunit 8.
   
 0.977
CISG_09931
Uncharacterized protein.
   
 0.971
CISG_00128
26S proteasome non-ATPase regulatory subunit 11.
   
 0.970
CISG_06141
Proteasome subunit alpha type.
   
 0.970
CISG_01810
26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
   
 0.970
CISG_08420
26S proteasome regulatory subunit rpn-8.
   
 0.970
CISG_07359
26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.
   
 0.969
CISG_05686
26S proteasome non-ATPase regulatory subunit 12.
   
 0.968
Your Current Organism:
Coccidioides immitis RMSCC3703
NCBI taxonomy Id: 454286
Other names: C. immitis RMSCC 3703, Coccidioides immitis RMSCC 3703
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