STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CISG_02217WD repeat containing protein. (1144 aa)    
Predicted Functional Partners:
CISG_05079
Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs.
   
 
 0.978
CISG_10339
FtsJ domain-containing protein.
   
 
 0.923
CISG_01869
AdoMet-dependent rRNA methyltransferase spb1.
   
 
 0.904
CISG_04550
WD_REPEATS_REGION domain-containing protein.
   
    0.900
CISG_08693
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
    0.864
CISG_02098
Histone chaperone; Histone chaperone that facilitates histone deposition and histone exchange and removal during nucleosome assembly and disassembly.
   
    0.835
CISG_09897
Nucleolar protein 5A.
   
    0.707
CISG_07230
Nucleolar protein 5A.
   
    0.707
CISG_06243
WD repeat-containing protein 36.
   
    0.684
CISG_06762
DUF2428 domain-containing protein.
   
 
 0.674
Your Current Organism:
Coccidioides immitis RMSCC3703
NCBI taxonomy Id: 454286
Other names: C. immitis RMSCC 3703, Coccidioides immitis RMSCC 3703
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.